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PCCA propionyl-CoA carboxylase subunit alpha [ Anser cygnoides (Swan goose) ]

Gene ID: 106031812, updated on 5-Aug-2024

Summary

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Gene symbol
PCCA
Gene description
propionyl-CoA carboxylase subunit alpha
See related
EnsemblRapid:ENSACDG00000013565
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See PCCA in Genome Data Viewer
Location:
chromosome: 1
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 1 NC_089873.1 (154928100..155215016, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927726.1 (2999352..3289252)

Chromosome 1 - NC_089873.1Genomic Context describing neighboring genes Neighboring gene transmembrane O-mannosyltransferase targeting cadherins 4 Neighboring gene gamma-glutamylamine cyclotransferase Neighboring gene uncharacterized LOC106031814 Neighboring gene uncharacterized LOC125183825 Neighboring gene Zic family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables propionyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
propionyl-CoA carboxylase alpha chain, mitochondrial
Names
propionyl-CoA carboxylase alpha subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089873.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    154928100..155215016 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048072682.2 → XP_047928639.2  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X2

  2. XM_066986247.1 → XP_066842348.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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