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HACD2 3-hydroxyacyl-CoA dehydratase 2 [ Anser cygnoides (Swan goose) ]

Gene ID: 106029896, updated on 5-Aug-2024

Summary

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Gene symbol
HACD2
Gene description
3-hydroxyacyl-CoA dehydratase 2
See related
EnsemblRapid:ENSACDG00000001936
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See HACD2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 6 NC_089878.1 (26752492..26775916)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927723.1 (3502651..3526152)

Chromosome 6 - NC_089878.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136791056 Neighboring gene myosin light chain kinase Neighboring gene adenylate cyclase 5 Neighboring gene SEC22 homolog A, vesicle trafficking protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089878.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    26752492..26775916
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048072385.2 → XP_047928342.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X2

  2. XM_013171238.3 → XP_013026692.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1

    See identical proteins and their annotated locations for XP_013026692.1

    UniProtKB/TrEMBL
    A0A8B9EFK2
    Conserved Domains (1) summary
    pfam04387
    Location:1 → 134
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA
Nucleotide Protein
Heading Accession and Version

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