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CREST2 conserved regulatory element of the islet-1 gene 2 [ Homo sapiens (human) ]

Gene ID: 106029244, updated on 17-Sep-2024

Summary

Gene symbol
CREST2
Gene description
conserved regulatory element of the islet-1 gene 2
Gene type
biological region
Feature type(s)
regulatory: enhancer
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CHREST2
Summary
This region contains a conserved sequence that functions as an enhancer in ventrally projecting motor neurons. This sequence may regulate expression of the ISL1 (ISL LIM homeobox 1) gene, located approximately 300 kb upstream. [provided by RefSeq, Dec 2020]
Orthologs
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Genomic context

See CREST2 in Genome Data Viewer
Location:
5q11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (51685620..51686204)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (52504825..52505409)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (50981454..50982038)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene protein mago nashi homolog Neighboring gene high mobility group box 1 pseudogene 47 Neighboring gene NANOG hESC enhancer GRCh37_chr5:50869817-50870439 Neighboring gene conserved regulatory element of the islet-1 gene 1 Neighboring gene VISTA enhancer hs543 Neighboring gene ISL1 proximal LF-SINE Neighboring gene RNA, 5S ribosomal pseudogene 182 Neighboring gene katanin regulatory subunit B1 like 1 pseudogene 4

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_042246.1 

    Range
    101..685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    51685620..51686204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    52504825..52505409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)