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St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 106000600, updated on 13-Mar-2024

Summary

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Gene symbol
St6galnac5
Gene description
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
See related
Ensembl:ENSDORG00000001866
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See St6galnac5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267444.1 (362617..530490, complement)

NW_012267444.1Genomic Context describing neighboring genes Neighboring gene dihydrofolate reductase pseudogene Neighboring gene adenylate kinase 5 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class K Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 Neighboring gene checkpoint protein HUS1 pseudogene Neighboring gene ankyrin repeat and SOCS box containing 17

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267444.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267444.1 Reference Dord_2.0

    Range
    362617..530490 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013035883.1 → XP_012891337.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

    UniProtKB/TrEMBL
    A0A1S3GTQ0
    Related
    ENSDORP00000001750.1, ENSDORT00000001865.2
    Conserved Domains (1) summary
    pfam00777
    Location:86 → 307
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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