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Cog5 component of oligomeric golgi complex 5 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105999666, updated on 13-Mar-2024

Summary

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Gene symbol
Cog5
Gene description
component of oligomeric golgi complex 5
See related
Ensembl:ENSDORG00000010580
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Cog5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267411.1 (486714..693228)

NW_012267411.1Genomic Context describing neighboring genes Neighboring gene B cell receptor associated protein 29 Neighboring gene dihydrouridine synthase 4 like Neighboring gene G protein-coupled receptor 22 Neighboring gene HMG-box transcription factor 1 Neighboring gene protein kinase cAMP-dependent type II regulatory subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267411.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267411.1 Reference Dord_2.0

    Range
    486714..693228
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013034737.1 → XP_012890191.1  conserved oligomeric Golgi complex subunit 5

    UniProtKB/TrEMBL
    A0A1S3GMZ9
    Related
    ENSDORP00000017635.1, ENSDORT00000034735.1
    Conserved Domains (2) summary
    pfam10392
    Location:35 → 158
    COG5; Golgi transport complex subunit 5
    cl00549
    Location:705 → 749
    ABC_membrane; ABC transporter transmembrane region
Nucleotide Protein
Heading Accession and Version

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