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Sars1 seryl-tRNA synthetase 1 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105997421, updated on 13-Mar-2024

Summary

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Gene symbol
Sars1
Gene description
seryl-tRNA synthetase 1
See related
Ensembl:ENSDORG00000006920
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Also known as
Sars
Orthologs
human mouse all
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Genomic context

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See Sars1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267362.1 (1904415..1926589, complement)

NW_012267362.1Genomic Context describing neighboring genes Neighboring gene proline and serine rich coiled-coil 1 Neighboring gene cadherin EGF LAG seven-pass G-type receptor 2 Neighboring gene endosome-lysosome associated apoptosis and autophagy regulator 1 Neighboring gene cilia and flagella associated protein 276

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267362.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in seryl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267362.1 Reference Dord_2.0

    Range
    1904415..1926589 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013031844.1 → XP_012887298.1  serine--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    A0A1S3GEL8
    Related
    ENSDORP00000006486.2, ENSDORT00000006920.2
    Conserved Domains (3) summary
    PLN02678
    Location:3 → 447
    PLN02678; seryl-tRNA synthetase
    pfam02403
    Location:3 → 72
    Seryl_tRNA_N; Seryl-tRNA synthetase N-terminal domain
    cl00268
    Location:152 → 421
    class_II_aaRS-like_core; Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it attaches ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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