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Galnt3 polypeptide N-acetylgalactosaminyltransferase 3 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105996552, updated on 13-Mar-2024

Summary

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Gene symbol
Galnt3
Gene description
polypeptide N-acetylgalactosaminyltransferase 3
See related
Ensembl:ENSDORG00000003316
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Galnt3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267221.1 (17049993..17087706, complement)

NW_012267221.1Genomic Context describing neighboring genes Neighboring gene sodium channel protein type 2 subunit alpha Neighboring gene cysteine and serine rich nuclear protein 3 Neighboring gene high mobility group protein B1 pseudogene Neighboring gene tetratricopeptide repeat domain 21B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267221.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267221.1 Reference Dord_2.0

    Range
    17049993..17087706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013030710.1 → XP_012886164.1  polypeptide N-acetylgalactosaminyltransferase 3

    See identical proteins and their annotated locations for XP_012886164.1

    UniProtKB/TrEMBL
    A0A1S3GBG8
    Related
    ENSDORP00000003098.2, ENSDORT00000003314.2
    Conserved Domains (4) summary
    cd02510
    Location:188 → 493
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:184 → 403
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:507 → 629
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:506 → 627
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_013030712.1 → XP_012886166.1  polypeptide N-acetylgalactosaminyltransferase 3

    See identical proteins and their annotated locations for XP_012886166.1

    UniProtKB/TrEMBL
    A0A1S3GBG8
    Conserved Domains (4) summary
    cd02510
    Location:188 → 493
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:184 → 403
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:507 → 629
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:506 → 627
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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