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Kirrel1 kirre like nephrin family adhesion molecule 1 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105996436, updated on 13-Mar-2024

Summary

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Gene symbol
Kirrel1
Gene description
kirre like nephrin family adhesion molecule 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Also known as
Kirrel
Orthologs
human mouse all
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Genomic context

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See Kirrel1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267347.1 (3316337..3336659, complement)

NW_012267347.1Genomic Context describing neighboring genes Neighboring gene T-cell surface glycoprotein CD1b-like Neighboring gene CD1d molecule Neighboring gene Fc receptor-like protein 2 Neighboring gene CD5 molecule like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267347.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1
Names
kin of IRRE like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267347.1 Reference Dord_2.0

    Range
    3316337..3336659 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013030513.1 → XP_012885967.1  kin of IRRE-like protein 1

    UniProtKB/TrEMBL
    A0A1S3GD74
    Conserved Domains (6) summary
    cd05759
    Location:128 → 209
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:381 → 478
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00410
    Location:304 → 379
    IG_like; Immunoglobulin like
    pfam07679
    Location:12 → 106
    I-set; Immunoglobulin I-set domain
    pfam13895
    Location:301 → 379
    Ig_2; Immunoglobulin domain
    cl11960
    Location:15 → 106
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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