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LOC105996167 N-acetyllactosaminide alpha-1,3-galactosyltransferase [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105996167, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105996167
Gene description
N-acetyllactosaminide alpha-1,3-galactosyltransferase
See related
Ensembl:ENSDORG00000027707
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
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Genomic context

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See LOC105996167 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267343.1 (1029580..1089373)

NW_012267343.1Genomic Context describing neighboring genes Neighboring gene tubulin tyrosine ligase like 11 Neighboring gene cytochrome c, somatic pseudogene Neighboring gene DAB2 interacting protein Neighboring gene N-acetyllactosaminide alpha-1,3-galactosyltransferase-like Neighboring gene N-acetyllactosaminide alpha-1,3-galactosyltransferase-like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267343.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide alpha-1,3-galactosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267343.1 Reference Dord_2.0

    Range
    1029580..1089373
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013030163.1 → XP_012885617.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X1

    See identical proteins and their annotated locations for XP_012885617.1

    UniProtKB/TrEMBL
    A0A1S3G9W8
    Conserved Domains (1) summary
    cl11394
    Location:76 → 359
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_013030162.1 → XP_012885616.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X1

    See identical proteins and their annotated locations for XP_012885616.1

    UniProtKB/TrEMBL
    A0A1S3G9W8
    Related
    ENSDORP00000022512.1, ENSDORT00000023488.1
    Conserved Domains (1) summary
    cl11394
    Location:76 → 359
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_013030164.1 → XP_012885618.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A1S3G9W5
    Conserved Domains (1) summary
    cl11394
    Location:51 → 334
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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