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Cherp calcium homeostasis endoplasmic reticulum protein [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105994720, updated on 13-Mar-2024

Summary

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Gene symbol
Cherp
Gene description
calcium homeostasis endoplasmic reticulum protein
See related
Ensembl:ENSDORG00000027623
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Cherp in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267324.1 (937638..945521)

NW_012267324.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 26 Neighboring gene solute carrier family 35 member E1 Neighboring gene calreticulin 3 Neighboring gene epidermal growth factor receptor pathway substrate 15 like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267324.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium homeostasis endoplasmic reticulum protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267324.1 Reference Dord_2.0

    Range
    937638..945521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013028350.1 → XP_012883804.1  calcium homeostasis endoplasmic reticulum protein isoform X1

    UniProtKB/TrEMBL
    A0A1S3G698
    Related
    ENSDORP00000026673.1, ENSDORT00000033986.1
    Conserved Domains (3) summary
    smart00443
    Location:805 → 855
    G_patch; glycine rich nucleic binding domain
    smart00648
    Location:1 → 33
    SWAP; Suppressor-of-White-APricot splicing regulator
    pfam04818
    Location:180 → 250
    CTD_bind; RNA polymerase II-binding domain

  2. XM_013028351.1 → XP_012883805.1  calcium homeostasis endoplasmic reticulum protein isoform X2

    UniProtKB/TrEMBL
    A0A1S3G554
    Related
    ENSDORP00000024530.1, ENSDORT00000034977.1
    Conserved Domains (3) summary
    smart00443
    Location:794 → 844
    G_patch; glycine rich nucleic binding domain
    smart00648
    Location:1 → 33
    SWAP; Suppressor-of-White-APricot splicing regulator
    pfam04818
    Location:180 → 239
    CTD_bind; RNA polymerase II-binding domain
Nucleotide Protein
Heading Accession and Version

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