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Rps9 ribosomal protein S9 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105994335, updated on 13-Mar-2024

Summary

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Gene symbol
Rps9
Gene description
ribosomal protein S9
See related
Ensembl:ENSDORG00000015828
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Rps9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267321.1 (3508215..3510357)

NW_012267321.1Genomic Context describing neighboring genes Neighboring gene membrane bound O-acyltransferase domain containing 7 Neighboring gene tRNA splicing endonuclease subunit 34 Neighboring gene leukocyte immunoglobulin-like receptor subfamily B member 5 Neighboring gene CDC42 effector protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267321.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of translational fidelity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267321.1 Reference Dord_2.0

    Range
    3508215..3510357
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013027809.1 → XP_012883263.1  40S ribosomal protein S9

    See identical proteins and their annotated locations for XP_012883263.1

    UniProtKB/TrEMBL
    A0A1S3G4P8
    Related
    ENSDORP00000014889.2, ENSDORT00000015828.2
    Conserved Domains (1) summary
    PTZ00155
    Location:11 → 177
    PTZ00155; 40S ribosomal protein S9; Provisional

  2. XM_013027810.1 → XP_012883264.1  40S ribosomal protein S9

    See identical proteins and their annotated locations for XP_012883264.1

    UniProtKB/TrEMBL
    A0A1S3G4P8
    Conserved Domains (1) summary
    PTZ00155
    Location:11 → 177
    PTZ00155; 40S ribosomal protein S9; Provisional
Nucleotide Protein
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