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Large1 LARGE xylosyl- and glucuronyltransferase 1 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105992087, updated on 13-Mar-2024

Summary

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Gene symbol
Large1
Gene description
LARGE xylosyl- and glucuronyltransferase 1
See related
Ensembl:ENSDORG00000000870
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Large1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267295.1 (6441802..6900108)

NW_012267295.1Genomic Context describing neighboring genes Neighboring gene HMG-box containing 4 Neighboring gene intestine specific homeobox Neighboring gene uncharacterized LOC105992062 Neighboring gene synapsin III Neighboring gene TIMP metallopeptidase inhibitor 3 Neighboring gene F-box protein 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267295.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase-like protein LARGE1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267295.1 Reference Dord_2.0

    Range
    6441802..6900108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013024905.1 → XP_012880359.1  glycosyltransferase-like protein LARGE1

    UniProtKB/TrEMBL
    A0A1S3FWF7
    Related
    ENSDORP00000000818.2, ENSDORT00000000870.2
    Conserved Domains (2) summary
    cd06431
    Location:138 → 417
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:473 → 742
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
Nucleotide Protein
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