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St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105989432, updated on 13-Mar-2024

Summary

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Gene symbol
St6galnac4
Gene description
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
See related
Ensembl:ENSDORG00000013334
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See St6galnac4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267271.1 (4286074..4295750, complement)

NW_012267271.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase 1 Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase like 1 Neighboring gene dolichyl-phosphate mannosyltransferase subunit 2, regulatory

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267271.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267271.1 Reference Dord_2.0

    Range
    4286074..4295750 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013021510.1 → XP_012876964.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_012876964.1

    UniProtKB/TrEMBL
    A0A1S3FM57
    Conserved Domains (1) summary
    pfam00777
    Location:58 → 288
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_013021508.1 → XP_012876962.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_012876962.1

    UniProtKB/TrEMBL
    A0A1S3FM57
    Conserved Domains (1) summary
    pfam00777
    Location:58 → 288
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_013021507.1 → XP_012876961.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_012876961.1

    UniProtKB/TrEMBL
    A0A1S3FM57
    Related
    ENSDORP00000021293.1, ENSDORT00000034618.1
    Conserved Domains (1) summary
    pfam00777
    Location:58 → 288
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_013021511.1 → XP_012876965.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A1S3FKV5
    Conserved Domains (1) summary
    pfam00777
    Location:58 → 243
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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