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Zbtb6 zinc finger and BTB domain containing 6 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105989430, updated on 13-Mar-2024

Summary

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Gene symbol
Zbtb6
Gene description
zinc finger and BTB domain containing 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Zbtb6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267271.1 (316834..320474, complement)

NW_012267271.1Genomic Context describing neighboring genes Neighboring gene phosducin like Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene zinc finger and BTB domain containing 26 Neighboring gene RAB GTPase activating protein 1 Neighboring gene G protein-coupled receptor 21

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267271.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267271.1 Reference Dord_2.0

    Range
    316834..320474 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013021502.1 → XP_012876956.1  zinc finger and BTB domain-containing protein 6

    UniProtKB/TrEMBL
    A0A1S3FK93
    Conserved Domains (5) summary
    smart00225
    Location:93 → 186
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:387 → 407
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:385 → 407
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:82 → 182
    BTB; BTB/POZ domain
    pfam13465
    Location:399 → 423
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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