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Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105989368, updated on 13-Mar-2024

Summary

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Gene symbol
Gbgt1
Gene description
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)
See related
Ensembl:ENSDORG00000011384
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Gbgt1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267271.1 (8155403..8169147, complement)

NW_012267271.1Genomic Context describing neighboring genes Neighboring gene carboxyl ester lipase Neighboring gene ral guanine nucleotide dissociation stimulator Neighboring gene putative insulin-like growth factor 2 antisense gene protein Neighboring gene 60S ribosomal protein L17 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267271.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables globoside alpha-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267271.1 Reference Dord_2.0

    Range
    8155403..8169147 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013021359.1 → XP_012876813.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A1S3FJN5
    Conserved Domains (1) summary
    cl11394
    Location:49 → 330
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_013021358.1 → XP_012876812.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1S3FLQ8
    Related
    ENSDORP00000010699.2, ENSDORT00000011384.2
    Conserved Domains (1) summary
    cl11394
    Location:60 → 347
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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