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Ano5 anoctamin 5 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105988144, updated on 13-Mar-2024

Summary

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Gene symbol
Ano5
Gene description
anoctamin 5
See related
Ensembl:ENSDORG00000004769
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Ano5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267262.1 (3290045..3338852)

NW_012267262.1Genomic Context describing neighboring genes Neighboring gene neural EGFL like 1 Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene retrovirus-related Pol polyprotein from transposon 17.6 Neighboring gene solute carrier family 17 member 6 Neighboring gene FA complementation group F

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267262.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267262.1 Reference Dord_2.0

    Range
    3290045..3338852
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013019678.1 → XP_012875132.1  anoctamin-5 isoform X2

    UniProtKB/TrEMBL
    A0A1S3FGT5
    Related
    ENSDORP00000004462.2, ENSDORT00000004769.2
    Conserved Domains (2) summary
    pfam04547
    Location:276 → 854
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:58 → 273
    Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin

  2. XM_013019677.1 → XP_012875131.1  anoctamin-5 isoform X1

    UniProtKB/TrEMBL
    A0A1S3FF72
    Related
    ENSDORP00000016849.1, ENSDORT00000034623.1
    Conserved Domains (2) summary
    pfam04547
    Location:260 → 838
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:42 → 257
    Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin
Nucleotide Protein
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