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Gcnt1 glucosaminyl (N-acetyl) transferase 1 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105987179, updated on 13-Mar-2024

Summary

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Gene symbol
Gcnt1
Gene description
glucosaminyl (N-acetyl) transferase 1
See related
Ensembl:ENSDORG00000024110
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Gcnt1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267256.1 (4996564..5001427, complement)

NW_012267256.1Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting 13 homolog A Neighboring gene ribosome biogenesis protein BRX1 homolog pseudogene Neighboring gene prune homolog 2 with BCH domain Neighboring gene proprotein convertase subtilisin/kexin type 5 Neighboring gene riboflavin kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267256.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
Names
glucosaminyl (N-acetyl) transferase 1, core 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267256.1 Reference Dord_2.0

    Range
    4996564..5001427 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013018379.1 → XP_012873833.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    See identical proteins and their annotated locations for XP_012873833.1

    UniProtKB/TrEMBL
    A0A1S3FB03
    Conserved Domains (1) summary
    pfam02485
    Location:123 → 391
    Branch; Core-2/I-Branching enzyme

  2. XM_013018380.1 → XP_012873834.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    See identical proteins and their annotated locations for XP_012873834.1

    UniProtKB/TrEMBL
    A0A1S3FB03
    Related
    ENSDORP00000017425.1, ENSDORT00000029085.1
    Conserved Domains (1) summary
    pfam02485
    Location:123 → 391
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

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