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St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105986204, updated on 13-Mar-2024

Summary

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Gene symbol
St3gal3
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 3
See related
Ensembl:ENSDORG00000005465
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See St3gal3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267249.1 (5223231..5414563)

NW_012267249.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type F Neighboring gene 60S ribosomal protein L23a pseudogene Neighboring gene lysine demethylase 4A Neighboring gene importin 13 Neighboring gene diphthamide biosynthesis 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267249.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267249.1 Reference Dord_2.0

    Range
    5223231..5414563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013017021.1 → XP_012872475.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A1S3F880
    Related
    ENSDORP00000005109.2, ENSDORT00000005462.2
    Conserved Domains (1) summary
    pfam00777
    Location:115 → 356
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_013017022.1 → XP_012872476.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A1S3F7C0
    Related
    ENSDORP00000017063.1, ENSDORT00000027895.1
    Conserved Domains (1) summary
    pfam00777
    Location:99 → 340
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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