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Znf205 zinc finger protein 205 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105981881, updated on 13-Mar-2024

Summary

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Gene symbol
Znf205
Gene description
zinc finger protein 205
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Znf205 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267230.1 (14459673..14466068, complement)

NW_012267230.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon CCG) Neighboring gene zinc finger protein 213 Neighboring gene zinc finger and SCAN domain containing 10 Neighboring gene matrix metallopeptidase 25

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267230.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 205

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267230.1 Reference Dord_2.0

    Range
    14459673..14466068 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013011230.1 → XP_012866684.1  zinc finger protein 205

    UniProtKB/TrEMBL
    A0A1S3ERZ5
    Conserved Domains (5) summary
    COG5048
    Location:289 → 513
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:409 → 429
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:491 → 513
    zf-C2H2; Zinc finger, C2H2 type
    pfam01352
    Location:130 → 159
    KRAB; KRAB box
    pfam13465
    Location:449 → 474
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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