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Zbtb44 zinc finger and BTB domain containing 44 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105980870, updated on 13-Mar-2024

Summary

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Gene symbol
Zbtb44
Gene description
zinc finger and BTB domain containing 44
See related
Ensembl:ENSDORG00000004536
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Zbtb44 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267226.1 (2660009..2681210, complement)

NW_012267226.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor like protein 2 Neighboring gene ST14 transmembrane serine protease matriptase Neighboring gene 40S ribosomal protein S24 pseudogene Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267226.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267226.1 Reference Dord_2.0

    Range
    2660009..2681210 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013009846.1 → XP_012865300.1  zinc finger and BTB domain-containing protein 44 isoform X4

    UniProtKB/TrEMBL
    A0A1S3EMX2
    Related
    ENSDORP00000021665.1, ENSDORT00000027068.1
    Conserved Domains (4) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  2. XM_013009845.1 → XP_012865299.1  zinc finger and BTB domain-containing protein 44 isoform X3

    UniProtKB/TrEMBL
    A0A1S3EMY7
    Conserved Domains (7) summary
    smart00225
    Location:32 → 128
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:351 → 431
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:383 → 403
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:471 → 493
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:381 → 403
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 125
    BTB; BTB/POZ domain
    pfam13465
    Location:395 → 420
    zf-H2C2_2; Zinc-finger double domain

  3. XM_013009844.1 → XP_012865298.1  zinc finger and BTB domain-containing protein 44 isoform X2

    UniProtKB/TrEMBL
    A0A1S3ELP3
    Conserved Domains (7) summary
    smart00225
    Location:32 → 128
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:351 → 432
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:384 → 404
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:472 → 494
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:382 → 404
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 125
    BTB; BTB/POZ domain
    pfam13465
    Location:396 → 421
    zf-H2C2_2; Zinc-finger double domain

  4. XM_013009843.1 → XP_012865297.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A1S3EP98
    Related
    ENSDORP00000004246.2, ENSDORT00000004536.2
    Conserved Domains (7) summary
    smart00225
    Location:32 → 128
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:489 → 511
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:399 → 421
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 125
    BTB; BTB/POZ domain
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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