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Kirrel3 kirre like nephrin family adhesion molecule 3 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105980571, updated on 13-Mar-2024

Summary

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Gene symbol
Kirrel3
Gene description
kirre like nephrin family adhesion molecule 3
See related
Ensembl:ENSDORG00000003993
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Kirrel3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267226.1 (9692081..9803520)

NW_012267226.1Genomic Context describing neighboring genes Neighboring gene ETS proto-oncogene 1, transcription factor Neighboring gene 60S ribosomal protein L37 pseudogene Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4 Neighboring gene decapping enzyme, scavenger

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267226.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3
Names
kin of IRRE like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267226.1 Reference Dord_2.0

    Range
    9692081..9803520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013009456.1 → XP_012864910.1  kin of IRRE-like protein 3

    UniProtKB/TrEMBL
    A0A1S3ELT3
    Related
    ENSDORP00000020001.1, ENSDORT00000024555.1
    Conserved Domains (6) summary
    cd05898
    Location:373 → 470
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00408
    Location:304 → 355
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:381 → 470
    IG_like; Immunoglobulin like
    pfam07679
    Location:290 → 371
    I-set; Immunoglobulin I-set domain
    pfam13927
    Location:209 → 273
    Ig_3; Immunoglobulin domain
    cl11960
    Location:156 → 201
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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