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LOC105945440 gastrula zinc finger protein XlCGF17.1-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 105945440, updated on 17-Aug-2024

Summary

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Official Symbol
LOC105945440provided by Xenbase
Official Full Name
gastrula zinc finger protein XlCGF17.1-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-29088699
See related
Ensembl:ENSXETG00000041669
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See LOC105945440 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (3336980..3338631)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683395.1 (350166..351651, complement)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene H2A clustered histone 14 Neighboring gene oocyte zinc finger protein XlCOF7.1 Neighboring gene oocyte zinc finger protein XlCOF7.1-like Neighboring gene oocyte zinc finger protein XlCOF7.1-like Neighboring gene oocyte zinc finger protein XlCOF7.1-like Neighboring gene zinc finger protein 208-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
gastrula zinc finger protein XlCGF17.1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    3336980..3338631
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012953448.3 → XP_012808902.1  gastrula zinc finger protein XlCGF17.1-like

    UniProtKB/TrEMBL
    A0A803K3L5
    Related
    ENSXETP00000114868.1, ENSXETT00000109530.1
    Conserved Domains (3) summary
    sd00017
    Location:177 → 197
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:118 → 140
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:217 → 242
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein Strain
Heading Accession and Version

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