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LOC105936100 zinc finger protein 239 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105936100, updated on 24-Aug-2024

Summary

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Gene symbol
LOC105936100
Gene description
zinc finger protein 239
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
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Genomic context

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See LOC105936100 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
3
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 17 NC_046377.1 (25308437..25315486, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234443.1 (640223..643407)

Chromosome 17 - NC_046377.1Genomic Context describing neighboring genes Neighboring gene potassium inwardly rectifying channel subfamily J member 8 Neighboring gene ATP-binding cassette, sub-family C (CFTR/MRP), member 9 Neighboring gene uncharacterized LOC118566624 Neighboring gene EGFR pathway substrate 8a, signaling adaptor Neighboring gene uncharacterized LOC118566592 Neighboring gene dual specificity phosphatase 16

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 239
Names
Zinc finger protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046377.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    25308437..25315486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036149294.1 → XP_036005187.1  zinc finger protein 239

    Conserved Domains (2) summary
    COG5048
    Location:175 → 374
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:300 → 320
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version