U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rbm8a RNA binding motif protein 8A [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105936063, updated on 20-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
rbm8a
Gene description
RNA binding motif protein 8A
See related
EnsemblRapid:ENSFHEG00000025296
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See rbm8a in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 3 NC_046363.1 (43504535..43510280)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234442.1 (1065409..1070317)

Chromosome 3 - NC_046363.1Genomic Context describing neighboring genes Neighboring gene neurotrophic tyrosine kinase, receptor, type 1 Neighboring gene antifreeze protein type IV Neighboring gene OTU deubiquitinase 7B Neighboring gene myotubularin related protein 11

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of exon-exon junction complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
RNA-binding protein 8A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046363.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    43504535..43510280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012876709.3 → XP_012732163.1  RNA-binding protein 8A isoform X2

    See identical proteins and their annotated locations for XP_012732163.1

    UniProtKB/TrEMBL
    A0A3Q2PGE2, A0A3Q2PGG0
    Conserved Domains (2) summary
    COG0724
    Location:49 → 156
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12324
    Location:65 → 152
    RRM_RBM8; RNA recognition motif in RNA-binding protein RBM8A, RBM8B nd similar proteins

  2. XM_012876708.3 → XP_012732162.1  RNA-binding protein 8A isoform X1

    See identical proteins and their annotated locations for XP_012732162.1

    UniProtKB/TrEMBL
    A0A3Q2PGG0
    Related
    ENSFHEP00000056192.1, ENSFHET00000045632.1
    Conserved Domains (2) summary
    COG0724
    Location:51 → 158
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12324
    Location:67 → 154
    RRM_RBM8; RNA recognition motif in RNA-binding protein RBM8A, RBM8B nd similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.