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znf652 zinc finger protein 652 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105932778, updated on 20-Aug-2024

Summary

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Gene symbol
znf652
Gene description
zinc finger protein 652
See related
EnsemblRapid:ENSFHEG00000037112
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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See znf652 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
7
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 16 NC_046376.1 (11619186..11646911, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234365.1 (324684..350741, complement)

Chromosome 16 - NC_046376.1Genomic Context describing neighboring genes Neighboring gene elongation factor Tu GTP binding domain containing 2 Neighboring gene phosphoethanolamine/phosphocholine phosphatase 1 Neighboring gene uncharacterized si:busm1-163l24.3 Neighboring gene prohibitin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 652

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046376.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    11619186..11646911 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036147797.1 → XP_036003690.1  zinc finger protein 652

    UniProtKB/TrEMBL
    A0A3Q2PGT6
    Related
    ENSFHEP00000040065.1, ENSFHET00000051234.1
    Conserved Domains (2) summary
    COG5048
    Location:476 → 525
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:424 → 444
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_012872048.3 → XP_012727502.2  zinc finger protein 652

    UniProtKB/TrEMBL
    A0A3Q2PGT6
    Conserved Domains (2) summary
    COG5048
    Location:476 → 525
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:424 → 444
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_036147795.1 → XP_036003688.1  zinc finger protein 652

    UniProtKB/TrEMBL
    A0A3Q2PGT6
    Conserved Domains (2) summary
    COG5048
    Location:476 → 525
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:424 → 444
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_036147794.1 → XP_036003687.1  zinc finger protein 652

    UniProtKB/TrEMBL
    A0A3Q2PGT6
    Conserved Domains (2) summary
    COG5048
    Location:476 → 525
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:424 → 444
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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