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elavl1a ELAV like RNA binding protein 1a [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105922356, updated on 20-Aug-2024

Summary

Gene symbol
elavl1a
Gene description
ELAV like RNA binding protein 1a
See related
EnsemblRapid:ENSFHEG00000035334
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Also known as
elavl1
Orthologs
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Genomic context

See elavl1a in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 19 NC_046379.1 (21170919..21184175, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012225475.1 (34087..46080)

Chromosome 19 - NC_046379.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin lambda constant 7-like Neighboring gene solute carrier family 1 member 8b Neighboring gene tetraspanin 37 Neighboring gene Ig lambda-2 chain C region-like Neighboring gene uncharacterized LOC118567017

Genomic regions, transcripts, and products

General protein information

Preferred Names
ELAV-like protein 1a
Names
ELAV 2-like protein
ELAV like RNA binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046379.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    21170919..21184175 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012858251.3XP_012713705.1  ELAV-like protein 1a isoform X4

    UniProtKB/TrEMBL
    A0A3Q2PNX4
    Conserved Domains (4) summary
    cd12377
    Location:258335
    RRM3_Hu; RNA recognition motif 3 in the Hu proteins family
    cd12650
    Location:34111
    RRM1_Hu; RNA recognition motif 1 in the Hu proteins family
    TIGR01661
    Location:32341
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:121204
    RRM_SF; RNA recognition motif (RRM) superfamily
  2. XM_012858250.3XP_012713704.1  ELAV-like protein 1a isoform X3

    UniProtKB/TrEMBL
    A0A3Q2PNX4
    Related
    ENSFHEP00000014412.2, ENSFHET00000032793.2
    Conserved Domains (4) summary
    cd12377
    Location:261338
    RRM3_Hu; RNA recognition motif 3 in the Hu proteins family
    cd12650
    Location:34111
    RRM1_Hu; RNA recognition motif 1 in the Hu proteins family
    TIGR01661
    Location:32344
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:121207
    RRM_SF; RNA recognition motif (RRM) superfamily
  3. XM_012858249.3XP_012713703.1  ELAV-like protein 1a isoform X2

    UniProtKB/TrEMBL
    A0A3Q2PNX4
    Conserved Domains (4) summary
    cd12377
    Location:262339
    RRM3_Hu; RNA recognition motif 3 in the Hu proteins family
    cd12650
    Location:38115
    RRM1_Hu; RNA recognition motif 1 in the Hu proteins family
    TIGR01661
    Location:36345
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:125208
    RRM_SF; RNA recognition motif (RRM) superfamily
  4. XM_012858247.3XP_012713701.1  ELAV-like protein 1a isoform X1

    UniProtKB/TrEMBL
    A0A146NU63, A0A3Q2PNX4
    Conserved Domains (4) summary
    cd12377
    Location:265342
    RRM3_Hu; RNA recognition motif 3 in the Hu proteins family
    cd12650
    Location:38115
    RRM1_Hu; RNA recognition motif 1 in the Hu proteins family
    TIGR01661
    Location:36348
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:125211
    RRM_SF; RNA recognition motif (RRM) superfamily
  5. XM_012858252.3XP_012713706.1  ELAV-like protein 1a isoform X5

    See identical proteins and their annotated locations for XP_012713706.1

    UniProtKB/TrEMBL
    A0A3Q2PNX4
    Related
    ENSFHEP00000038644.1, ENSFHET00000041347.1
    Conserved Domains (4) summary
    cd12377
    Location:245322
    RRM3_Hu; RNA recognition motif 3 in the Hu proteins family
    cd12650
    Location:1895
    RRM1_Hu; RNA recognition motif 1 in the Hu proteins family
    TIGR01661
    Location:16328
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:105191
    RRM_SF; RNA recognition motif (RRM) superfamily
  6. XM_012858253.3XP_012713707.1  ELAV-like protein 1a isoform X5

    See identical proteins and their annotated locations for XP_012713707.1

    UniProtKB/TrEMBL
    A0A3Q2PNX4
    Conserved Domains (4) summary
    cd12377
    Location:245322
    RRM3_Hu; RNA recognition motif 3 in the Hu proteins family
    cd12650
    Location:1895
    RRM1_Hu; RNA recognition motif 1 in the Hu proteins family
    TIGR01661
    Location:16328
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:105191
    RRM_SF; RNA recognition motif (RRM) superfamily