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LOC105919334 zinc finger protein 502 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105919334, updated on 20-Aug-2024

Summary

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Gene symbol
LOC105919334
Gene description
zinc finger protein 502
See related
EnsemblRapid:ENSFHEG00000014071
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
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Genomic context

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See LOC105919334 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) Unplaced Scaffold NW_023396900.1 (8498..40865)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012224820.1 (253528..278309, complement)

NW_023396900.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118560752 Neighboring gene transcription factor 7 Neighboring gene phosphatidylcholine:ceramide cholinephosphotransferase 2-like Neighboring gene sphingomyelin synthase 2b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable serine/threonine-protein kinase kinX; zinc finger protein 502
Names
Zinc finger protein 808
zinc finger protein 25

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NW_023396900.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    8498..40865
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036132157.1 → XP_035988050.1  probable serine/threonine-protein kinase kinX isoform X4

  2. XM_036132154.1 → XP_035988047.1  zinc finger protein 502 isoform X1

    Conserved Domains (4) summary
    COG5189
    Location:502 → 590
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:598 → 618
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:652 → 674
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:694 → 719
    zf-H2C2_2; Zinc-finger double domain

  3. XM_036132155.1 → XP_035988048.1  zinc finger protein 502 isoform X2

    Related
    ENSFHEP00000040294.1, ENSFHET00000071664.1
    Conserved Domains (4) summary
    COG5189
    Location:500 → 588
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:596 → 616
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:650 → 672
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:692 → 717
    zf-H2C2_2; Zinc-finger double domain

  4. XM_036132156.1 → XP_035988049.1  zinc finger protein 502 isoform X3

    Conserved Domains (4) summary
    COG5189
    Location:496 → 584
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:592 → 612
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:646 → 668
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:688 → 713
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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