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lars2 leucyl-tRNA synthetase 2, mitochondrial [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105917280, updated on 20-Aug-2024

Summary

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Gene symbol
lars2
Gene description
leucyl-tRNA synthetase 2, mitochondrial
See related
EnsemblRapid:ENSFHEG00000001812
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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See lars2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
31
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 3 NC_046363.1 (17777146..17885226, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012224637.1 (313513..369164, complement)

Chromosome 3 - NC_046363.1Genomic Context describing neighboring genes Neighboring gene DEP domain containing MTOR-interacting protein Neighboring gene Wilms tumor protein 1-interacting protein Neighboring gene transmembrane protein 158 Neighboring gene transmembrane protein 158 Neighboring gene CUB domain-containing protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables leucine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in leucyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable leucine--tRNA ligase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046363.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    17777146..17885226 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012852042.3 → XP_012707496.2  probable leucine--tRNA ligase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A3Q2NQ03
    Related
    ENSFHEP00000059392.1, ENSFHET00000067981.1
    Conserved Domains (1) summary
    PRK00390
    Location:78 → 901
    leuS; leucyl-tRNA synthetase; Validated

  2. XM_036131298.1 → XP_035987191.1  probable leucine--tRNA ligase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A3Q2NQ03
    Related
    ENSFHEP00000001055.2, ENSFHET00000014510.2
    Conserved Domains (1) summary
    PRK00390
    Location:78 → 901
    leuS; leucyl-tRNA synthetase; Validated

  3. XM_036131292.1 → XP_035987185.1  probable leucine--tRNA ligase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A3Q2NQ03
    Conserved Domains (1) summary
    PRK00390
    Location:78 → 901
    leuS; leucyl-tRNA synthetase; Validated
Nucleotide Protein
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