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pop7 POP7 homolog, ribonuclease P/MRP subunit [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105916014, updated on 20-Aug-2024

Summary

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Gene symbol
pop7
Gene description
POP7 homolog, ribonuclease P/MRP subunit
See related
EnsemblRapid:ENSFHEG00000033290
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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See pop7 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
3
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 14 NC_046374.1 (27139988..27143018)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012224559.1 (91100..94722, complement)

Chromosome 14 - NC_046374.1Genomic Context describing neighboring genes Neighboring gene endonuclease domain-containing 1 protein-like Neighboring gene endonuclease domain-containing 1 protein-like Neighboring gene UFM1-specific peptidase 1 Neighboring gene erythropoietin a Neighboring gene uncharacterized LOC118565740 Neighboring gene zona pellucida sperm-binding protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA 5'-leader removal IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleolar ribonuclease P complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonuclease MRP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonuclease P protein subunit p20
Names
Ribonuclease P protein subunit p20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046374.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    27139988..27143018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012850309.3 → XP_012705763.1  ribonuclease P protein subunit p20

    See identical proteins and their annotated locations for XP_012705763.1

    UniProtKB/TrEMBL
    A0A3Q2QNV0
    Related
    ENSFHEP00000043623.1, ENSFHET00000035701.1
    Conserved Domains (1) summary
    pfam12328
    Location:46 → 144
    Rpp20; Rpp20 subunit of nuclear RNase MRP and P

  2. XM_012850308.3 → XP_012705762.1  ribonuclease P protein subunit p20

    See identical proteins and their annotated locations for XP_012705762.1

    UniProtKB/TrEMBL
    A0A3Q2QNV0
    Related
    ENSFHEP00000041032.1, ENSFHET00000072516.1
    Conserved Domains (1) summary
    pfam12328
    Location:46 → 144
    Rpp20; Rpp20 subunit of nuclear RNase MRP and P
Nucleotide Protein
Heading Accession and Version

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