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LOC105907421 C-terminal-binding protein 1 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105907421, updated on 18-Jun-2024

Summary

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Gene symbol
LOC105907421
Gene description
C-terminal-binding protein 1
See related
Ensembl:ENSCHAG00020020817
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
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Genomic context

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See LOC105907421 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 8 NC_045159.1 (7382845..7393550)

Chromosome 8 - NC_045159.1Genomic Context describing neighboring genes Neighboring gene lymphocyte cytosolic protein 2a Neighboring gene family with sequence similarity 53 member C Neighboring gene T cell immunoglobulin and mucin domain containing 4 Neighboring gene hepatitis A virus cellular receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045159.1 Chromosome 8 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045159.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    7382845..7393550
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012835739.3 → XP_012691193.1  C-terminal-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A6P3W871
    Related
    ENSCHAP00020047552.1, ENSCHAT00020050981.1
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_031571680.2 → XP_031427540.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P8FVW6
    Related
    ENSCHAP00020047549.1, ENSCHAT00020050978.1
    Conserved Domains (1) summary
    cd05299
    Location:5 → 323
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_042708438.1 → XP_042564372.1  C-terminal-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8M1KKH3
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_031571681.2 → XP_031427541.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P8FVQ4
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

RNA

  1. XR_004164114.1 RNA Sequence

Nucleotide Protein
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