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zgc:101663 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C [ Clupea harengus (Atlantic herring) ]

Gene ID: 105906382, updated on 18-Jun-2024

Summary

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Gene symbol
zgc:101663
Gene description
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C
See related
Ensembl:ENSCHAG00020014500
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
zebrafish all
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Genomic context

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See zgc:101663 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 4 NC_045155.1 (18131083..18144546)

Chromosome 4 - NC_045155.1Genomic Context describing neighboring genes Neighboring gene prolyl 4-hydroxylase, transmembrane a Neighboring gene adaptor related protein complex 4 subunit beta 1 Neighboring gene uncharacterized LOC122132840 Neighboring gene thyrotropin subunit beta-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045155.1 Chromosome 4 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045155.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    18131083..18144546
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031566541.2 → XP_031422401.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    UniProtKB/TrEMBL
    A0A6P8FFA3
    Related
    ENSCHAP00020032382.1, ENSCHAT00020034641.1
    Conserved Domains (1) summary
    pfam04666
    Location:73 → 304
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases