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LOC105905652 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like [ Clupea harengus (Atlantic herring) ]

Gene ID: 105905652, updated on 18-Jun-2024

Summary

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Gene symbol
LOC105905652
Gene description
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like
See related
Ensembl:ENSCHAG00020003604
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
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Genomic context

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See LOC105905652 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
14
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 21 NC_045172.1 (22593849..22601939, complement)

Chromosome 21 - NC_045172.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin ligase TRAF3IP2-like Neighboring gene chloride channel, voltage-sensitive 4 Neighboring gene uncharacterized LOC116218139 Neighboring gene CLIP-associating protein 1-B Neighboring gene U4atac minor spliceosomal RNA Neighboring gene zinc finger protein GLI2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045172.1 Chromosome 21 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045172.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    22593849..22601939 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031558494.2 → XP_031414354.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like

    UniProtKB/TrEMBL
    A0A6P8EQY4
    Related
    ENSCHAP00020007101.1, ENSCHAT00020007744.1
    Conserved Domains (1) summary
    pfam00233
    Location:250 → 483
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
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