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rxylt1 ribitol xylosyltransferase 1 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105905127, updated on 18-Jun-2024

Summary

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Gene symbol
rxylt1
Gene description
ribitol xylosyltransferase 1
See related
Ensembl:ENSCHAG00020020536
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Also known as
tmem5
Orthologs
human zebrafish all
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Genomic context

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See rxylt1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 3 NC_045154.1 (9820156..9824357)

Chromosome 3 - NC_045154.1Genomic Context describing neighboring genes Neighboring gene cytochrome b-c1 complex subunit Rieske, mitochondrial-like Neighboring gene protein C19orf12 homolog Neighboring gene SLIT-ROBO Rho GTPase activating protein 1a Neighboring gene E3 ubiquitin-protein ligase TRIM35-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045154.1 Chromosome 3 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribitol beta-1,4-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribitol-5-phosphate xylosyltransferase 1
Names
transmembrane protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045154.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    9820156..9824357
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031564516.2 → XP_031420376.1  ribitol-5-phosphate xylosyltransferase 1

    UniProtKB/TrEMBL
    A0A6P8F8T6
    Related
    ENSCHAP00020046542.1, ENSCHAT00020049968.1
Nucleotide Protein
Heading Accession and Version

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