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LOC105904909 mitochondrial carnitine/acylcarnitine carrier protein [ Clupea harengus (Atlantic herring) ]

Gene ID: 105904909, updated on 18-Jun-2024

Summary

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Gene symbol
LOC105904909
Gene description
mitochondrial carnitine/acylcarnitine carrier protein
See related
Ensembl:ENSCHAG00020017858
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Also known as
slc25a20
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Genomic context

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See LOC105904909 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 5 NC_045156.1 (28014395..28023852)

Chromosome 5 - NC_045156.1Genomic Context describing neighboring genes Neighboring gene NCK-interacting protein with SH3 domain Neighboring gene uncharacterized LOC116220591 Neighboring gene cAMP-dependent protein kinase type II-alpha regulatory subunit-like Neighboring gene NCK-interacting protein with SH3 domain-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045156.1 Chromosome 5 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein
Names
solute carrier family 25 member 20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045156.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    28014395..28023852
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031568413.2 → XP_031424273.1  mitochondrial carnitine/acylcarnitine carrier protein

    UniProtKB/TrEMBL
    A0A6P8F6Y9
    Related
    ENSCHAP00020040461.1, ENSCHAT00020043373.1
    Conserved Domains (1) summary
    pfam00153
    Location:108 → 198
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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