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dnajb6a DnaJ heat shock protein family (Hsp40) member B6a [ Clupea harengus (Atlantic herring) ]

Gene ID: 105900649, updated on 18-Jun-2024

Summary

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Gene symbol
dnajb6a
Gene description
DnaJ heat shock protein family (Hsp40) member B6a
See related
Ensembl:ENSCHAG00020025285
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
zebrafish all
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Genomic context

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See dnajb6a in Genome Data Viewer
Location:
chromosome: 25
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 25 NC_045176.1 (8668212..8676050)

Chromosome 25 - NC_045176.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily B member 2a Neighboring gene transient receptor potential cation channel, subfamily A, member 1a Neighboring gene sonic hedgehog signaling molecule b Neighboring gene RNA binding motif protein 33b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045176.1 Chromosome 25 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045176.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    8668212..8676050
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012827997.3 → XP_012683451.2  dnaJ homolog subfamily B member 6a isoform X1

    UniProtKB/TrEMBL
    A0A6P3VXL1
    Related
    ENSCHAP00020057926.1, ENSCHAT00020062335.1
    Conserved Domains (1) summary
    PRK10767
    Location:4 → 148
    PRK10767; chaperone protein DnaJ; Provisional

  2. XM_042703737.1 → XP_042559671.1  dnaJ homolog subfamily B member 6a isoform X2

    UniProtKB/TrEMBL
    A0A8M1K6V2
    Conserved Domains (1) summary
    PRK10767
    Location:4 → 148
    PRK10767; chaperone protein DnaJ; Provisional
Nucleotide Protein
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