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LOC105900348 delta-sarcoglycan [ Clupea harengus (Atlantic herring) ]

Gene ID: 105900348, updated on 7-Dec-2023

Summary

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Gene symbol
LOC105900348
Gene description
delta-sarcoglycan
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Also known as
sgcd
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Genomic context

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See LOC105900348 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 8 NC_045159.1 (19005129..19103507)

Chromosome 8 - NC_045159.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116221357 Neighboring gene 5S ribosomal RNA Neighboring gene delta-sarcoglycan-like Neighboring gene U7 small nuclear RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045159.1 Chromosome 8 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan
Names
sarcoglycan delta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045159.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    19005129..19103507
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031572714.2 → XP_031428574.1  delta-sarcoglycan

    UniProtKB/TrEMBL
    A0A6P8FQD6
    Conserved Domains (1) summary
    pfam04790
    Location:22 → 277
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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