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hs3st1l1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1 [ Clupea harengus (Atlantic herring) ]

Gene ID: 105893470, updated on 18-Jun-2024

Summary

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Gene symbol
hs3st1l1
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1
See related
Ensembl:ENSCHAG00020013752
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
zebrafish all
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Genomic context

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See hs3st1l1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 13 NC_045164.1 (21712165..21739105)

Chromosome 13 - NC_045164.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 518A Neighboring gene B cell linker Neighboring gene deoxynucleotidyltransferase, terminal Neighboring gene uncharacterized LOC116223219 Neighboring gene ventral expressed homeobox

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045164.1 Chromosome 13 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045164.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    21712165..21739105
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012819892.3 → XP_012675346.2  heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1

    UniProtKB/TrEMBL
    A0A6P3VMU7
    Related
    ENSCHAP00020030258.1, ENSCHAT00020032515.1
    Conserved Domains (1) summary
    pfam00685
    Location:55 → 292
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases