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alg11 ALG11 alpha-1,2-mannosyltransferase [ Clupea harengus (Atlantic herring) ]

Gene ID: 105890411, updated on 18-Sep-2024

Summary

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Gene symbol
alg11
Gene description
ALG11 alpha-1,2-mannosyltransferase
See related
Ensembl:ENSCHAG00020014797
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
human zebrafish all
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Genomic context

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See alg11 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 21 NC_045172.1 (1953783..1958674)

Chromosome 21 - NC_045172.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH-type containing 13 Neighboring gene carboxypeptidase B2 (plasma) Neighboring gene secreted phosphoprotein 2 Neighboring gene Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045172.1 Chromosome 21 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045172.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    1953783..1958674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012816434.3 → XP_012671888.2  GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase

    UniProtKB/TrEMBL
    A0A6P3VHD5
    Related
    ENSCHAP00020033094.1, ENSCHAT00020035458.1
    Conserved Domains (1) summary
    cd03806
    Location:62 → 502
    GT4_ALG11-like; alpha-1,2-mannosyltransferase ALG11 and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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