U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

lman2lb lectin, mannose-binding 2-like b [ Clupea harengus (Atlantic herring) ]

Gene ID: 105890012, updated on 19-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
lman2lb
Gene description
lectin, mannose-binding 2-like b
See related
Ensembl:ENSCHAG00020029942
Gene type
protein coding
RefSeq status
MODEL
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See lman2lb in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) 7 NC_045158.1 (10421140..10428592)

Chromosome 7 - NC_045158.1Genomic Context describing neighboring genes Neighboring gene TM2 domain containing 2 Neighboring gene T-box transcription factor 3b Neighboring gene leukocyte surface antigen CD53-like Neighboring gene leukocyte surface antigen CD53-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_045158.1 Chromosome 7 Reference Ch_v2.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lectin, mannose-binding 2-like b
Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ch_v2.0.2 Primary Assembly

Genomic

  1. NC_045158.1 Reference Ch_v2.0.2 Primary Assembly

    Range
    10421140..10428592
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012815973.3 → XP_012671427.1  lectin, mannose-binding 2-like b

    UniProtKB/TrEMBL
    A0A6P3VGB6
    Related
    ENSCHAP00020067049.1, ENSCHAT00020073510.1
    Conserved Domains (1) summary
    cl14058
    Location:53 → 301
    lectin_L-type; legume lectins

RNA

  1. XR_004164009.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases