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PPT2 palmitoyl-protein thioesterase 2 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 105886934, updated on 13-Mar-2024

Summary

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Gene symbol
PPT2
Gene description
palmitoyl-protein thioesterase 2
See related
Ensembl:ENSOGAG00000010185
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See PPT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852426.1 (3013856..3026724)

NW_003852426.1Genomic Context describing neighboring genes Neighboring gene FKBP prolyl isomerase like Neighboring gene proline rich transmembrane protein 1 Neighboring gene EGF like domain multiple 8 Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 1 Neighboring gene ring finger protein 5 Neighboring gene advanced glycosylation end-product specific receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852426 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables palmitoyl hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiolester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal thioesterase PPT2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852426.1 Reference OtoGar3

    Range
    3013856..3026724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023512760.1 → XP_023368528.1  lysosomal thioesterase PPT2 isoform X2

    Conserved Domains (1) summary
    PLN02633
    Location:38 → 260
    PLN02633; palmitoyl protein thioesterase family protein

  2. XM_012804816.2 → XP_012660270.1  lysosomal thioesterase PPT2 isoform X1

    UniProtKB/TrEMBL
    H0X249
    Related
    ENSOGAP00000009106.2, ENSOGAT00000010190.2
    Conserved Domains (1) summary
    cl21494
    Location:38 → 280
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version

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