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PNPLA6 patatin like phospholipase domain containing 6 [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105885632, updated on 13-Mar-2024

Summary

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Gene symbol
PNPLA6
Gene description
patatin like phospholipase domain containing 6
See related
Ensembl:ENSMICG00000003776
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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See PNPLA6 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
36
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 24 NC_033683.1 (6378560..6401591)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012198685.1 (3359871..3382872)

Chromosome 24 - NC_033683.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 358 Neighboring gene mucolipin TRP cation channel 1 Neighboring gene uncharacterized LOC105885635 Neighboring gene calmodulin regulated spectrin associated protein family member 3 Neighboring gene XPA binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylcholine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuropathy target esterase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033683.1 Reference Mmur_3.0 Primary Assembly

    Range
    6378560..6401591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012790743.1 → XP_012646197.1  neuropathy target esterase isoform X4

    See identical proteins and their annotated locations for XP_012646197.1

    UniProtKB/TrEMBL
    A0A8B7I5L4, A0A8C5UNB0
    Related
    ENSMICP00000003455.2, ENSMICT00000003790.3
    Conserved Domains (4) summary
    cd07225
    Location:916 → 1221
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    COG0664
    Location:141 → 283
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    COG1752
    Location:921 → 1205
    RssA; Predicted acylesterase/phospholipase RssA, containd patatin domain [General function prediction only]
    cd00038
    Location:587 → 695
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  2. XM_012790745.2 → XP_012646199.1  neuropathy target esterase isoform X5

    UniProtKB/TrEMBL
    A0A8B7I8T9, A0A8C5UNB0
    Conserved Domains (4) summary
    cd07225
    Location:915 → 1220
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    COG0664
    Location:141 → 283
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    COG1752
    Location:920 → 1204
    RssA; Predicted acylesterase/phospholipase RssA, containd patatin domain [General function prediction only]
    cd00038
    Location:587 → 695
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  3. XM_012790744.2 → XP_012646198.1  neuropathy target esterase isoform X4

    See identical proteins and their annotated locations for XP_012646198.1

    UniProtKB/TrEMBL
    A0A8B7I5L4, A0A8C5UNB0
    Related
    ENSMICP00000033987.1, ENSMICT00000029907.2
    Conserved Domains (4) summary
    cd07225
    Location:916 → 1221
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    COG0664
    Location:141 → 283
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    COG1752
    Location:921 → 1205
    RssA; Predicted acylesterase/phospholipase RssA, containd patatin domain [General function prediction only]
    cd00038
    Location:587 → 695
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  4. XM_012790741.1 → XP_012646195.1  neuropathy target esterase isoform X2

    UniProtKB/TrEMBL
    A0A8B7I7L8, A0A8C5VH83
    Related
    ENSMICP00000020539.2, ENSMICT00000033080.2
    Conserved Domains (4) summary
    cd07225
    Location:955 → 1260
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    COG0664
    Location:180 → 322
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    COG1752
    Location:960 → 1244
    RssA; Predicted acylesterase/phospholipase RssA, containd patatin domain [General function prediction only]
    cd00038
    Location:626 → 734
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  5. XM_012790740.1 → XP_012646194.1  neuropathy target esterase isoform X1

    UniProtKB/TrEMBL
    A0A8B7I8T4, A0A8C5VH83
    Conserved Domains (4) summary
    cd07225
    Location:955 → 1260
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    COG0664
    Location:180 → 322
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    COG1752
    Location:960 → 1244
    RssA; Predicted acylesterase/phospholipase RssA, containd patatin domain [General function prediction only]
    cd00038
    Location:626 → 734
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  6. XM_012790742.1 → XP_012646196.1  neuropathy target esterase isoform X3

    UniProtKB/TrEMBL
    A0A8B7I5L3, A0A8C5VH83
    Related
    ENSMICP00000039034.2, ENSMICT00000051353.2
    Conserved Domains (4) summary
    cd07225
    Location:954 → 1259
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    COG0664
    Location:180 → 322
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    COG1752
    Location:959 → 1243
    RssA; Predicted acylesterase/phospholipase RssA, containd patatin domain [General function prediction only]
    cd00038
    Location:626 → 734
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
Nucleotide Protein
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