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CHST12 carbohydrate sulfotransferase 12 [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105868483, updated on 13-Mar-2024

Summary

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Gene symbol
CHST12
Gene description
carbohydrate sulfotransferase 12
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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See CHST12 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 17 NC_033676.1 (24543185..24565272)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012204463.1 (7945749..7967836, complement)

Chromosome 17 - NC_033676.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit B Neighboring gene translation machinery-associated protein 7 Neighboring gene kinesin-like protein KIF19 Neighboring gene uncharacterized LOC105868503 Neighboring gene uncharacterized LOC105868264

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033676.1 Reference Mmur_3.0 Primary Assembly

    Range
    24543185..24565272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012759446.1 → XP_012614900.1  carbohydrate sulfotransferase 12

    See identical proteins and their annotated locations for XP_012614900.1

    UniProtKB/TrEMBL
    A0A8B7FZD4, A0A8C5VT76
    Conserved Domains (1) summary
    pfam03567
    Location:154 → 399
    Sulfotransfer_2; Sulfotransferase family

  2. XM_012759445.1 → XP_012614899.1  carbohydrate sulfotransferase 12

    See identical proteins and their annotated locations for XP_012614899.1

    UniProtKB/TrEMBL
    A0A8B7FZD4, A0A8C5VT76
    Conserved Domains (1) summary
    pfam03567
    Location:154 → 399
    Sulfotransfer_2; Sulfotransferase family

  3. XM_012759440.1 → XP_012614894.1  carbohydrate sulfotransferase 12

    See identical proteins and their annotated locations for XP_012614894.1

    UniProtKB/TrEMBL
    A0A8B7FZD4, A0A8C5VT76
    Conserved Domains (1) summary
    pfam03567
    Location:154 → 399
    Sulfotransfer_2; Sulfotransferase family

  4. XM_012759442.2 → XP_012614896.1  carbohydrate sulfotransferase 12

    See identical proteins and their annotated locations for XP_012614896.1

    UniProtKB/TrEMBL
    A0A8B7FZD4, A0A8C5VT76
    Conserved Domains (1) summary
    pfam03567
    Location:154 → 399
    Sulfotransfer_2; Sulfotransferase family

  5. XM_012759439.2 → XP_012614893.1  carbohydrate sulfotransferase 12

    See identical proteins and their annotated locations for XP_012614893.1

    UniProtKB/TrEMBL
    A0A8B7FZD4, A0A8C5VT76
    Conserved Domains (1) summary
    pfam03567
    Location:154 → 399
    Sulfotransfer_2; Sulfotransferase family

  6. XM_012759444.2 → XP_012614898.1  carbohydrate sulfotransferase 12

    See identical proteins and their annotated locations for XP_012614898.1

    UniProtKB/TrEMBL
    A0A8B7FZD4, A0A8C5VT76
    Conserved Domains (1) summary
    pfam03567
    Location:154 → 399
    Sulfotransfer_2; Sulfotransferase family

  7. XM_012759443.2 → XP_012614897.1  carbohydrate sulfotransferase 12

    See identical proteins and their annotated locations for XP_012614897.1

    UniProtKB/TrEMBL
    A0A8B7FZD4, A0A8C5VT76
    Conserved Domains (1) summary
    pfam03567
    Location:154 → 399
    Sulfotransfer_2; Sulfotransferase family

  8. XM_012759447.2 → XP_012614901.1  carbohydrate sulfotransferase 12

    See identical proteins and their annotated locations for XP_012614901.1

    UniProtKB/TrEMBL
    A0A8B7FZD4, A0A8C5VT76
    Conserved Domains (1) summary
    pfam03567
    Location:154 → 399
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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