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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105859359, updated on 13-Mar-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
See related
Ensembl:ENSMICG00000048898
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 1 NC_033660.1 (113101077..113161674, complement)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012200353.1 (396008..460073)

Chromosome 1 - NC_033660.1Genomic Context describing neighboring genes Neighboring gene adaptin ear-binding coat-associated protein 1 pseudogene Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene translation initiation factor IF-2-like Neighboring gene 60S ribosomal protein L12 pseudogene Neighboring gene soma ferritin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033660.1 Reference Mmur_3.0 Primary Assembly

    Range
    113101077..113161674 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012743090.2 → XP_012598544.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8B7EVK6
    Conserved Domains (1) summary
    pfam00777
    Location:1 → 184
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_012743089.2 → XP_012598543.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_012598543.1

    UniProtKB/TrEMBL
    A0A8C5YIT2
    Conserved Domains (1) summary
    pfam00777
    Location:83 → 328
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_012743084.2 → XP_012598538.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_012598538.1

    UniProtKB/TrEMBL
    A0A8C5YIT2
    Conserved Domains (1) summary
    pfam00777
    Location:83 → 328
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_012743088.2 → XP_012598542.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_012598542.1

    UniProtKB/TrEMBL
    A0A8C5YIT2
    Related
    ENSMICP00000050837.1, ENSMICT00000072264.1
    Conserved Domains (1) summary
    pfam00777
    Location:83 → 328
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_012743087.2 → XP_012598541.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_012598541.1

    UniProtKB/TrEMBL
    A0A8C5YIT2
    Related
    ENSMICP00000050920.1, ENSMICT00000073099.1
    Conserved Domains (1) summary
    pfam00777
    Location:83 → 328
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_012743085.2 → XP_012598539.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_012598539.1

    UniProtKB/TrEMBL
    A0A8C5YIT2
    Conserved Domains (1) summary
    pfam00777
    Location:83 → 328
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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