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SMPD3 sphingomyelin phosphodiesterase 3 [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105858928, updated on 13-Mar-2024

Summary

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Gene symbol
SMPD3
Gene description
sphingomyelin phosphodiesterase 3
See related
Ensembl:ENSMICG00000011452
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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See SMPD3 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 20 NC_033679.1 (55584132..55664648)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012200241.1 (2903272..2983757, complement)

Chromosome 20 - NC_033679.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L11-like Neighboring gene ZFP90 zinc finger protein Neighboring gene uncharacterized LOC105858931 Neighboring gene uncharacterized LOC105858932 Neighboring gene protein arginine methyltransferase 7 Neighboring gene solute carrier family 7 member 6 opposite strand

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingomyelin phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sphingomyelin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingomyelin phosphodiesterase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033679.1 Reference Mmur_3.0 Primary Assembly

    Range
    55584132..55664648
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012742357.2 → XP_012597811.1  sphingomyelin phosphodiesterase 3

    See identical proteins and their annotated locations for XP_012597811.1

    UniProtKB/TrEMBL
    A0A8B7ERR9
    Conserved Domains (1) summary
    cd09078
    Location:339 → 647
    nSMase; Neutral sphingomyelinases (nSMase) catalyze the hydrolysis of sphingomyelin in biological membranes to ceramide and phosphorylcholine

  2. XM_012742359.1 → XP_012597813.1  sphingomyelin phosphodiesterase 3

    See identical proteins and their annotated locations for XP_012597813.1

    UniProtKB/TrEMBL
    A0A8B7ERR9
    Conserved Domains (1) summary
    cd09078
    Location:339 → 647
    nSMase; Neutral sphingomyelinases (nSMase) catalyze the hydrolysis of sphingomyelin in biological membranes to ceramide and phosphorylcholine

  3. XM_012742360.1 → XP_012597814.1  sphingomyelin phosphodiesterase 3

    See identical proteins and their annotated locations for XP_012597814.1

    UniProtKB/TrEMBL
    A0A8B7ERR9
    Related
    ENSMICP00000010424.1, ENSMICT00000011451.3
    Conserved Domains (1) summary
    cd09078
    Location:339 → 647
    nSMase; Neutral sphingomyelinases (nSMase) catalyze the hydrolysis of sphingomyelin in biological membranes to ceramide and phosphorylcholine

  4. XM_012742358.2 → XP_012597812.1  sphingomyelin phosphodiesterase 3

    See identical proteins and their annotated locations for XP_012597812.1

    UniProtKB/TrEMBL
    A0A8B7ERR9
    Conserved Domains (1) summary
    cd09078
    Location:339 → 647
    nSMase; Neutral sphingomyelinases (nSMase) catalyze the hydrolysis of sphingomyelin in biological membranes to ceramide and phosphorylcholine
Nucleotide Protein
Heading Accession and Version

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