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SLC11A1 solute carrier family 11 member 1 [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105857706, updated on 13-Mar-2024

Summary

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Gene symbol
SLC11A1
Gene description
solute carrier family 11 member 1
See related
Ensembl:ENSMICG00000032402
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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See SLC11A1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 8 NC_033667.1 (19758077..19768994, complement)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012199798.1 (1215334..1226253, complement)

Chromosome 8 - NC_033667.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 37 Neighboring gene villin 1 Neighboring gene CTD small phosphatase 1 Neighboring gene ciliogenesis associated TTC17 interacting protein Neighboring gene PNKD metallo-beta-lactamase domain containing Neighboring gene transmembrane BAX inhibitor motif containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadmium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in metal ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
natural resistance-associated macrophage protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033667.1 Reference Mmur_3.0 Primary Assembly

    Range
    19758077..19768994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012740292.2 → XP_012595746.1  natural resistance-associated macrophage protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B7ENZ2
    Conserved Domains (2) summary
    TIGR01197
    Location:65 → 465
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters
    pfam01566
    Location:87 → 472
    Nramp; Natural resistance-associated macrophage protein

  2. XM_012740295.2 → XP_012595749.1  natural resistance-associated macrophage protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8B7ELZ6
    Conserved Domains (2) summary
    TIGR01197
    Location:65 → 413
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters
    pfam01566
    Location:87 → 420
    Nramp; Natural resistance-associated macrophage protein

  3. XM_012740294.2 → XP_012595748.1  natural resistance-associated macrophage protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8B7ELP9
    Conserved Domains (2) summary
    TIGR01197
    Location:55 → 424
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters
    pfam01566
    Location:59 → 431
    Nramp; Natural resistance-associated macrophage protein

  4. XM_012740296.2 → XP_012595750.1  natural resistance-associated macrophage protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8B7ELQ3
    Conserved Domains (2) summary
    TIGR01197
    Location:47 → 412
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters
    pfam01566
    Location:47 → 419
    Nramp; Natural resistance-associated macrophage protein

  5. XM_012740293.2 → XP_012595747.1  natural resistance-associated macrophage protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B7EN35
    Related
    ENSMICP00000028181.1, ENSMICT00000051278.2
    Conserved Domains (2) summary
    TIGR01197
    Location:53 → 453
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters
    pfam01566
    Location:75 → 460
    Nramp; Natural resistance-associated macrophage protein
Nucleotide Protein
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