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LCT lactase [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105857603, updated on 13-Mar-2024

Summary

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Gene symbol
LCT
Gene description
lactase
See related
Ensembl:ENSMICG00000012949
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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See LCT in Genome Data Viewer
Location:
chromosome: 8
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 8 NC_033667.1 (89471679..89527461, complement)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012199797.1 (3084406..3143902, complement)

Chromosome 8 - NC_033667.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105857623 Neighboring gene R3H domain-containing protein 1-like Neighboring gene UBX domain protein 4 Neighboring gene minichromosome maintenance complex component 6 Neighboring gene aspartyl-tRNA synthetase 1 Neighboring gene nucleophosmin pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactase-phlorizin hydrolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033667.1 Reference Mmur_3.0 Primary Assembly

    Range
    89471679..89527461 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020288516.1 → XP_020144105.1  lactase-phlorizin hydrolase

    UniProtKB/TrEMBL
    A0A8B7XAB2, A0A8C5V255
    Related
    ENSMICP00000011803.3, ENSMICT00000012952.3
    Conserved Domains (2) summary
    pfam00232
    Location:906 → 1371
    Glyco_hydro_1; Glycosyl hydrolase family 1
    cl23725
    Location:1380 → 1830
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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