U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PRPF18 pre-mRNA processing factor 18 [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105856361, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PRPF18
Gene description
pre-mRNA processing factor 18
See related
Ensembl:ENSMICG00000006572
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PRPF18 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 25 NC_033684.1 (15610407..15660720, complement)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012199330.1 (1874768..1924122, complement)

Chromosome 25 - NC_033684.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 107 member B Neighboring gene FERM domain containing 4A Neighboring gene uncharacterized LOC105856362 Neighboring gene uncharacterized LOC105872006 Neighboring gene uncharacterized LOC105872003 Neighboring gene BEN domain containing 7

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in generation of catalytic spliceosome for second transesterification step IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U2-type post-spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U4/U6 x U5 tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U5 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
pre-mRNA-splicing factor 18

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033684.1 Reference Mmur_3.0 Primary Assembly

    Range
    15610407..15660720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012738009.2 → XP_012593463.1  pre-mRNA-splicing factor 18 isoform X1

    UniProtKB/TrEMBL
    A0A8B7EG11, A0A8C5XJU7
    Related
    ENSMICP00000022769.1, ENSMICT00000043413.2
    Conserved Domains (2) summary
    smart00500
    Location:88 → 131
    SFM; Splicing Factor Motif, present in Prp18 and Pr04
    pfam02840
    Location:200 → 337
    Prp18; Prp18 domain

  2. XM_012738010.2 → XP_012593464.1  pre-mRNA-splicing factor 18 isoform X2

    UniProtKB/TrEMBL
    A0A8C5V9L6, A0A8C5XJU7
    Related
    ENSMICP00000018509.1, ENSMICT00000034499.2
    Conserved Domains (2) summary
    smart00500
    Location:79 → 122
    SFM; Splicing Factor Motif, present in Prp18 and Pr04
    pfam02840
    Location:191 → 328
    Prp18; Prp18 domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.