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Wdr59 WD repeat domain 59 [ Monomorium pharaonis (pharaoh ant) ]

Gene ID: 105830169, updated on 10-Oct-2024

Summary

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Gene symbol
Wdr59
Gene description
WD repeat domain 59
See related
EnsemblRapid:LOC105830169
Gene type
protein coding
RefSeq status
MODEL
Organism
Monomorium pharaonis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Monomorium
Orthologs
fruit fly honey bee all
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Genomic context

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See Wdr59 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
20
Annotation release Status Assembly Chr Location
102 current ASM1337386v2 (GCF_013373865.1) 11 NC_050477.1 (2011706..2018340)
101 previous assembly ASM326058v2 (GCF_003260585.2) Unplaced Scaffold NW_021023615.1 (6472486..6476868, complement)

Chromosome 11 - NC_050477.1Genomic Context describing neighboring genes Neighboring gene short transmembrane mitochondrial protein 1 Neighboring gene ER membrane protein complex subunit 4 Neighboring gene repressor of RNA polymerase III transcription Maf1 Neighboring gene adenosylhomocysteinase Neighboring gene leucine-rich repeat-containing protein 23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genes associated with ant social behavior show distinct transcriptional and evolutionary patterns. Mikheyev AS, et al. Elife, 2015 Jan 26. PMID 25621766, Free PMC Article
  2. Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants. Morandin C, et al. Genome Biol, 2016 Mar 7. PMID 26951146, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GATOR complex protein WDR59

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monomorium pharaonis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1337386v2

Genomic

  1. NC_050477.1 Reference ASM1337386v2

    Range
    2011706..2018340
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036294089.1 → XP_036149982.1  GATOR complex protein WDR59 isoform X1

    Related
    XP_036149982.1, XM_036294089.1
    Conserved Domains (3) summary
    COG2319
    Location:26 → 322
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:61 → 105
    7WD40; WD40 repeat [structural motif]
    cd16692
    Location:920 → 966
    mRING-H2-C3H3C2_WDR59; Modified RING finger, H2 subclass (C3H3C2-type), found in WD repeat-containing protein 59 (WDR59) and similar proteins

  2. XM_036294091.1 → XP_036149984.1  GATOR complex protein WDR59 isoform X3

    Related
    XP_036149984.1, XM_036294091.1
    Conserved Domains (3) summary
    COG2319
    Location:26 → 322
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:61 → 105
    7WD40; WD40 repeat [structural motif]
    cd16692
    Location:910 → 956
    mRING-H2-C3H3C2_WDR59; Modified RING finger, H2 subclass (C3H3C2-type), found in WD repeat-containing protein 59 (WDR59) and similar proteins

  3. XM_036294090.1 → XP_036149983.1  GATOR complex protein WDR59 isoform X2

    Related
    XP_036149983.1, XM_036294090.1
    Conserved Domains (3) summary
    COG2319
    Location:26 → 322
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:61 → 105
    7WD40; WD40 repeat [structural motif]
    cd16692
    Location:919 → 965
    mRING-H2-C3H3C2_WDR59; Modified RING finger, H2 subclass (C3H3C2-type), found in WD repeat-containing protein 59 (WDR59) and similar proteins
Nucleotide Protein
Heading Accession and Version

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