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GANAB glucosidase II alpha subunit [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105827059, updated on 13-Mar-2024

Summary

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Gene symbol
GANAB
Gene description
glucosidase II alpha subunit
See related
Ensembl:ENSPCOG00000014717
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See GANAB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012136081.1 (280740..296759, complement)

NW_012136081.1Genomic Context describing neighboring genes Neighboring gene EMAP like 3 Neighboring gene retinal outer segment membrane protein 1 Neighboring gene beta-1,3-glucuronyltransferase 3 Neighboring gene integrator complex subunit 5 Neighboring gene chromosome unknown C11orf98 homolog Neighboring gene citrate synthase lysine methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012136081.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucan 1,3-alpha-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glucosidase II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral alpha-glucosidase AB

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012136081.1 Reference Pcoq_1.0 Primary Assembly

    Range
    280740..296759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012665089.1 → XP_012520543.1  neutral alpha-glucosidase AB isoform X2

    UniProtKB/TrEMBL
    A0A2K6EZ63, A0A2K6EZ91
    Related
    ENSPCOP00000007035.1, ENSPCOT00000017575.1
    Conserved Domains (3) summary
    cd06603
    Location:383 → 850
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:243 → 383
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    pfam01055
    Location:364 → 809
    Glyco_hydro_31; Glycosyl hydrolases family 31

  2. XM_012665083.1 → XP_012520537.1  neutral alpha-glucosidase AB isoform X1

    UniProtKB/TrEMBL
    A0A2K6EZ88, A0A2K6EZ91
    Related
    ENSPCOP00000007034.1, ENSPCOT00000017574.1
    Conserved Domains (3) summary
    cd06603
    Location:405 → 872
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:265 → 405
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    pfam01055
    Location:386 → 831
    Glyco_hydro_31; Glycosyl hydrolases family 31
Nucleotide Protein
Heading Accession and Version

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