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SGPL1 sphingosine-1-phosphate lyase 1 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105826051, updated on 13-Mar-2024

Summary

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Gene symbol
SGPL1
Gene description
sphingosine-1-phosphate lyase 1
See related
Ensembl:ENSPCOG00000014971
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See SGPL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012154685.1 (134158..246920)

NW_012154685.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 14 Neighboring gene thymus, brain and testes associated Neighboring gene pterin-4 alpha-carbinolamine dehydratase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012154685.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphinganine-1-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine-1-phosphate lyase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012154685.1 Reference Pcoq_1.0 Primary Assembly

    Range
    134158..246920
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012663963.1 → XP_012519417.1  sphingosine-1-phosphate lyase 1

    UniProtKB/TrEMBL
    A0A2K6F0F1
    Related
    ENSPCOP00000007471.1, ENSPCOT00000018014.1
    Conserved Domains (1) summary
    cd06450
    Location:109 → 472
    DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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